3. Data, Science & AI
Found 9989 skills
pylabrobot
davila7
Automates laboratory workflows by controlling liquid handlers, plate readers, and lab equipment, supporting both simulation and physical hardware execution.
datacommons-client
davila7
Provides programmatic access to Data Commons for querying global statistical data including demographics, economics, health, and environmental metrics.
opentargets-database
davila7
Queries Open Targets Platform for target-disease associations, drug target data, and therapeutic evidence to support biomedical research and drug discovery.
stable-diffusion-image-generation
davila7
Generates images from text prompts using Stable Diffusion models via HuggingFace Diffusers.
pyvene-interventions
davila7
Guides causal interventions on PyTorch models using the pyvene framework for causal tracing, activation patching, and hypothesis testing.
pathml
davila7
Computational pathology toolkit for AI-driven analysis of whole-slide images, multiplex imaging, and spatial proteomics data in medical workflows.
ray-train
davila7
Orchestrates distributed training for PyTorch, TensorFlow, and HuggingFace models across clusters, supporting hyperparameter tuning and scaling to thousands of nodes.
huggingface-tokenizers
davila7
High-performance NLP tokenization supporting BPE, WordPiece, and Unigram. Integrates with Hugging Face Transformers for research and production.
ensembl-database
davila7
Provides programmatic access to Ensembl's REST API for genomic data retrieval, including gene, sequence, and variant analysis across multiple species.
pymatgen
davila7
Computational materials science toolkit for crystal structure analysis, band structure calculations, and Materials Project integration.
etetoolkit
davila7
Toolkit for phylogenetic tree manipulation, evolutionary event detection, and visualization using NCBI taxonomy in phylogenomics research.
denario
davila7
Automates scientific research workflows from data analysis to LaTeX publication via multiagent AI, supporting methodology development and literature searches.
lambda-labs-gpu-cloud
davila7
Offers on-demand and reserved GPU cloud instances for ML training/inference with SSH access, persistent storage, and multi-node clusters.
gwas-database
davila7
Queries NHGRI-EBI GWAS Catalog for SNP-trait associations, p-values, and summary statistics to support genetic epidemiology and polygenic risk score analysis.
geo-database
davila7
Accesses NCBI GEO database to search, download, and retrieve gene expression datasets (microarray/RNA-seq) in SOFT/Matrix formats for transcriptomics analysis.
latchbio-integration
davila7
Builds and deploys bioinformatics workflows with Latch SDK, Nextflow/Snakemake integration, and LatchFile/LatchDir data handling.
pufferlib
davila7
Provides tools for reinforcement learning development, including PPO training, custom environment creation, and integration with Gymnasium and PettingZoo.
scikit-bio
davila7
Provides tools for biological sequence analysis, phylogenetic tree construction, and microbiome diversity metrics including UniFrac and PERMANOVA.
pydicom
davila7
Python library for reading, writing, and processing DICOM medical imaging files, including metadata, pixel data, and anonymization.
quantizing-models-bitsandbytes
davila7
Quantizes LLMs to 8-bit or 4-bit, reducing memory usage by 50-75% with minimal accuracy loss for efficient inference.
evaluating-llms-harness
davila7
Evaluates large language models against 60+ academic benchmarks, supporting industry-standard tools for model comparison and research reporting.
phoenix-observability
davila7
Open-source platform for tracing, evaluating, and monitoring LLM applications to debug, assess performance, and gain real-time production insights.
chroma
davila7
Open-source database for storing AI embeddings and metadata, enabling vector search and RAG applications with a simple API.
sentence-transformers
davila7
Framework for generating high-quality text and image embeddings using pre-trained models, optimized for semantic search, RAG, and similarity tasks in production environments.